Skip to main content
SLAC National Accelerator Laboratory
LCLSLinac Coherent Light Source

User Portal Login   |  LCLS Internal Site

  • About
    • Organizational Chart
    • People & Committees
      • Leadership
      • Users' Executive Committee
      • Scientific Advisory Committee
      • LCLS Detector Advisory Committee
      • Proposal Review Panel
      • SLAC Photon Science Faculty
      • Users' Recognition Award
      • Young Investigator Award
    • Strategic Plan 2023-2028
    • Our Science
    • Internships
      • Intern Testimonials
      • Summer Student Poster Sessions
    • Jobs
    • Multimedia
      • Virtual Tours
      • Fact Sheets & Infographics
      • Image Gallery
      • Youtube Videos
    • Coming to SLAC
    • Contact Us
  • User Resources
    • User Research Administration (URA) Office
    • Schedules
    • Proposals
      • Run 26 Proposal Call
      • Proposal Preparation Guidelines
      • MeV-UED Proposals
      • Proposal Review Process
      • Universal Proposal System (UPS)
      • Submit Proposal
      • Archived Proposal Calls
    • User Agreements
    • Policies
    • Proprietary Research
    • Safety & Training
      • Work Planning & Control
      • LCLS Building Orientation
      • Hutch 6 Non-Permit Confined Space Training
      • Sample Delivery Training
      • Sample Prep Lab Training
    • SLAC User Access Requirements
      • Computer Accounts
      • Data Collection & Analysis (PCDS)
      • DAQ
      • Shipping Equipment & Materials
      • Financial Accounts
    • Links By Category
  • Publications
    • LCLS Publications
    • Search Publications
    • Submit New Publication
    • Archived Publications
  • Instruments
    • chemRIXS
      • Science Goals
      • Experimental Methods
      • Specifications
      • Standard Configurations
      • Publications
    • CXI
      • Experimental Methods
      • Specifications
      • Components
      • Standard Configurations
      • Publications
    • MEC
      • Science Goals
      • Experimental Methods
      • Specifications
      • Diagnostics & Components
      • Standard Configurations
      • Lasers & Beam Delivery
      • Publications
    • MFX
      • Science Goals
      • Experimental Methods
      • Specifications
      • Standard Configurations
      • Publications
    • qRIXS
      • Science Goals
      • Experimental Methods
      • Layout & Specifications
      • Capabilities
    • TMO
      • Science Goals
      • Layout & Specifications
      • Standard Configuration
      • Publications
    • TXI
      • Science Goals
      • Experimental Methods
      • Layout & Specifications
    • XCS
      • Experimental Methods
      • Specifications
      • Components
      • Standard Configurations
      • Operation Modes
      • Publications
    • XPP
      • Science Goals
      • Experimental Methods
      • Specifications
      • Components
      • Standard Configurations
      • Publications
    • MeV-UED
      • Specifications
      • Run 6 Scientific Capabilities
      • Schematics
      • Endstations
      • Proposals
      • Proposal Review Process
      • Schedule
      • Publications
    • LCLS-II-HE
    • DXS
      • Science Goals
      • Experimental Methods
      • Specifications
    • Instrument Maps
    • Standard Configurations
  • Machine
    • Machine Status
    • Machine FAQ (NC Linac)
    • Parameters
    • Schedules
  • Projects
    • LCLS-II
      • Science
      • Design & Performance
      • Commissioning
    • LCLS-II-HE
      • Science
      • Design & Performance
      • Meetings and Reports
      • Instruments
      • Internal Site
    • MEC-U
      • Science Mission
      • Design & Performance
      • Workshops & Meetings
      • Publications
      • News
      • Resources & Photos
      • Internal Site
  • Departments
    • SRD Leadership
    • Atomic, Molecular, & Optical Sciences
      • Research Interests
      • People
      • Research Highlights
      • Attosecond Science Campaign
    • Biological Sciences & Sample Preparations
      • Sample Environment & Delivery
      • Sample Preparation Laboratories
      • Biolabs at the Arrillaga Science Center (ASC)
      • Equipment Inventory
      • Chemical Inventory
    • Chemical Sciences
      • Research Interests
      • People
      • News & Highlights
      • Publications
    • Material Sciences
      • Research Interests
      • People
    • Matter in Extreme Conditions
      • Research Interests
      • People
      • Publications
    • Laser Sciences
      • Research Interests
      • Laser Capabilities​
      • People
      • User Resources
    • Detectors
      • Technologies
      • People
      • User Resources
    • Experiment Data Systems
      • Infrastructure
      • People
      • Projects
      • User Resources
    • Experiment Control Systems
      • Leadership
  • News
    • Science News
    • Announcements & Updates
    • External News Features
      • Archive
  • Links

Breadcrumb

  1. Home
  2. Instruments
  3. MFX (Macromolecular Femtosecond Crystallography)
  4. …
Facebook Share X Post LinkedIn Share Email Send
  • chemRIXS
    • Science Goals
    • Experimental Methods
    • Specifications
    • Standard Configurations
    • Publications
  • CXI
    • Experimental Methods
    • Specifications
    • Components
    • Standard Configurations
    • Publications
  • MEC
    • Science Goals
    • Experimental Methods
    • Specifications
    • Diagnostics & Components
    • Standard Configurations
    • Lasers & Beam Delivery
    • Publications
  • MFX
    • Science Goals
    • Experimental Methods
    • Specifications
    • Standard Configurations
    • Publications
  • qRIXS
    • Science Goals
    • Experimental Methods
    • Layout & Specifications
    • Capabilities
  • TMO
    • Science Goals
    • Layout & Specifications
    • Standard Configuration
    • Publications
  • TXI
    • Science Goals
    • Experimental Methods
    • Layout & Specifications
  • XCS
    • Experimental Methods
    • Specifications
    • Components
    • Standard Configurations
    • Operation Modes
    • Publications
  • XPP
    • Science Goals
    • Experimental Methods
    • Specifications
    • Components
    • Standard Configurations
    • Publications
  • MeV-UED
    • Specifications
    • Run 6 Scientific Capabilities
    • Schematics
    • Endstations
    • Proposals
    • Proposal Review Process
    • Schedule
    • Publications
  • LCLS-II-HE
  • DXS
    • Science Goals
    • Experimental Methods
    • Specifications
  • Instrument Maps
  • Standard Configurations

MFX Standard Configurations

  • Configuration #1
  • Configuration #2
  • Configuration #3

MFX Standard Configuration #1 for Run 26

#1 Helium Chamber for Vertical Liquid Jets

Types of Experiments

With this standard configuration, MFX supports jet-based Serial Femtosecond Crystallography (SFX) experiments at atmospheric pressure and temperature with noise minimization from the Helium environment. This will be possible with or without a pump laser. Also supported will be Small Angle and Wide Angle X-ray Scattering (SAXS/WAXS) with or without a pump laser using the wide variety of sample delivery jets, either LCLS-owned or supplied by the user groups. The detector will be an ePix10K-2.1M capable of 120 Hz operation (temporarily unavailable) or a Jungfrau 16M capable of 120 Hz operation.

X-ray Focus

The incident photon energy is preferred to be 9.5 keV but justified deviations can be considered. The X-ray focus can vary over a range of ~3-4 µm to ~100 µm.

Sample Environment

A liquid jet chamber will be used. It is enclosed to provide a helium filled volume for the sample and the detector, including the following features that will be supported in this standard configuration.

Liquid Jet Mechanical System

The liquid jet mechanical system consists of an XYZ stage to position a nozzle inside the helium box. Any sample delivery system which is compatible with this mechanical system and the standard nozzle mount will be supported. This included Gas Dynamic Virtual Nozzle (GDVN), Lipidic Cubic Phase (LCP), the Microfluidic Electrokinetic Sample Holder (MESH) or other viscous extrusion systems, many types of mixing nozzles and any other system that can be mounted on the nozzle mount. Contact the MFX scientists for details on the nozzle rod and the injector mechanical system.

On-axis Sample Viewing System

The system at MFX will be equipped with an on-axis jet viewing system. This system provides a ~3 micron resolution view of the jet from the perspective of what the X-ray beam sees. This provides a rough alignment of the jet without any detailed information about the sample content or jet size and speed.

Perpendicular High Resolution Jet Imaging System

A high resolution jet imaging system will be installed to provide a perpendicular view of the jet. A continuous illumination will be used to provide the necessary illumination.

Pump Lasers

Time-resolved experiments employing tunable nanosecond and/or femtosecond pulses will be supported under this standard configuration. In the case that both nanosecond and femtosecond lasers are desired, the chosen wavelength will need to be compatible with the same optics set and should not require reconfiguration of the optical setup. While it is should not be expected that two lasers can be supported during a single experiment, a minimum required condition for this would be using only one of them at a time and switching between them during an off-shift if optics do not need to be modified.

Nanosecond Laser

An EKSPLA NL-204 Nd:YAG laser is available that can provide <8 ns pulses at 1064, 532, or 355 nm. Depending on the wavelength, the pulses can have energies of 1 - 4 mJ. It also has a repetition rate from 1 - 120 Hz. An Opolette HR 355 is also available for <8 ns pump laser pulses over a wide tunability range (410-2200 nm). Both laser systems propagate in free-space, but can be fiber-coupled. Note that the efficiency of the optics and the performance of the laser will not be the same for the entire wavelength range. The maximum achievable power density will be determined by the existing optical system and cannot be modified. Contact the MFX scientists to discuss specific needs and determine if they can be achieved using this standard configuration of the laser. The expected performance at the source is shown below (the energy on target will be substantially lower due to transport losses).

Femtosecond Laser

The fundamental (800 nm) or second harmonic (400 nm) of the ~50-150 fs Ti:Sapphire Coherent Astrella laser is also available. The system can also be used with a TOPAS-Prime Optical Parametric Amplifier (OPA) capable of 480-2400 nm wavelengths. Again, note that the efficiency of the optics and the performance of the laser and the OPA will not be the same for the entire wavelength range. The achievable peak intensity/fluence will be determined by the existing optical system and will not be modified. Contact the MFX scientists to discuss specific needs and to confirm whether they can be achieved in this standard configuration of the laser. The expected performance at the source is shown below. The approximate on target energy is shown below.

topas

Timing Diagnostics

For the nanosecond laser, a fast diode will be available to verify the time overlap of the laser and the X-rays.

For the femtosecond laser, the MFX time tool will be available to record single shot arrival times that can be post-sorted. Time zero at the sample can be obtained to better than 200 fs using a MFX-supplied target to measure the index of refraction change induced by the x-ray beam.

Detector

The detector will be an ePix10K-2.1M capable of 120 Hz operation (temporarily unavailable) or a Jungfrau 16M capable of 120 Hz operation with a 4000 x 4000 frame size of 75 µm pixels. It is anticipated this detector will be available this run but for more information about this detector please contact MFX Instrument Staff.

MFX Instrument Staff

Leland Gee, Daniel Rosenberg, Sebastian Dehe, Fred Poitevin, Sandra Mous, Greg Gate, Roberto Alonso-Mori, Andy Aquila, Mark Hunter, Meng Liang, Ray Sierra, Sebastien Boutet

 

Parameter Table

To be considered for scheduling in this standard configuration, users will be required to include a table in the proposal that lists the specific experimental parameters to ensure compatibility with these configurations. If the experimental parameters are not compatible with the standard configuration or if the table of parameters is incomplete, the proposal will be reviewed and considered for scheduling as general user proposal. Please see the table of required parameters. No fundamental changes to the standard configurations will occur, but some details of the configuration may be updated in response to inquiries, so users should recheck the website before submitting your proposal to confirm that you have the latest information. Address any questions to the instrument staff.

MFX Standard Configuration #2 for Run 26

#2 Vertical  Liquid Jets and Fixed Targets in Air

Types of Experiments

With this standard configuration, MFX will support jet-based Serial Femtosecond Crystallography (SFX) experiments at atmospheric pressure and temperature in ambient air. This will be possible with or without a pump laser. Also supported will be Small Angle and Wide Angle X-ray Scattering (SAXS/WAXS) with or without a pump laser using the wide variety of sample delivery jets, either LCLS-owned or supplied by the user groups. This configuration will also support fixed target scanning. The detector will be an ePix10K-2.1M capable of 120 Hz operation (temporarily unavailable) or a Jungfrau 16M capable of 120 Hz operation.

X-ray Focus

The incident photon energy is preferred to be 9.5 keV but justified deviations can be considered. The X-ray focus can vary over a range of ~3-4 µm to ~100 µm.

Sample Environment

The following features that will be supported in this standard configuration.

Liquid Jet Mechanical System

The liquid jet mechanical system consists of an XYZ stage to position a nozzle inside the helium box. Any sample delivery system which is compatible with this mechanical system and the standard nozzle mount will be supported. This included Gas Dynamic Virtual Nozzle (GDVN), Lipidic Cubic Phase (LCP), the Microfluidic Electrokinetic Sample Holder (MESH) or other viscous extrusion systems, many types of mixing nozzles and any other system that can be mounted on the nozzle mount. Fixed target samples acan also be mounted on this system. Contact the MFX scientists for details on the nozzle rod and the injector mechanical system.

On-axis Sample Viewing System

The system will be equipped with an on-axis jet viewing system. This system provides a ~3 micron resolution view of the jet from the perspective of what the X-ray beam sees. This provides a rough alignment of the sample or the the jet without any detailed information about the sample content or jet size and speed.

Perpendicular High Resolution Jet Imaging System

A high resolution perpendicular sample/jet imaging system will be installed to provide a perpendicular view of the jet. A continuous illumination will be used to provide the necessary illumination.

Nanosecond Laser

An EKSPLA NL-204 Nd:YAG laser is available that can provide <8 ns pulses at 1064, 532, or 355 nm. Depending on the wavelength, the pulses can have energies of 1 - 4 mJ. It also has a repetition rate from 1 - 120 Hz. An Opolette HR 355 is also available for <8 ns pump laser pulses over a wide tunability range (410-2200 nm). Both laser systems propagate in free-space, but can be fiber-coupled. Note that the efficiency of the optics and the performance of the laser will not be the same for the entire wavelength range. The maximum achievable power density will be determined by the existing optical system and cannot be modified. Contact the MFX scientists to discuss specific needs and determine if they can be achieved using this standard configuration of the laser. The expected performance at the source is shown below (the energy on target will be substantially lower due to transport losses).

Femtosecond Laser

The fundamental (800 nm) or second harmonic (400 nm) of the ~50-150 fs Ti:Sapphire Coherent Astrella laser is available, delivered to the sample collinearly with the X-rays, with in-coupling ~250 mm upstream of the sample and with the focusing lens ~350 mm away from the sample. The system can also be used with a TOPAS-Prime Optical Parametric Amplifier (OPA) capable of 480-2400 nm wavelengths. Again, note that the efficiency of the optics and the performance of the laser and the OPA will not be the same for the entire wavelength range. The achievable peak intensity/fluence will be determined by the existing optical system and will not be modified. Contact the MFX scientists to discuss specific needs and to confirm whether they can be achieved in this standard configuration of the laser.  The approximate on target energy is shown below.

topas

Timing Diagnostics

For the nanosecond laser, a fast diode will be available to verify the time overlap of the laser and the X-rays.

For the femtosecond laser, the MFX time tool will be available to record single shot arrival times that can be post-sorted. Time zero at the sample can be obtained to better than 200 fs using a MFX-supplied target to measure the index of refraction change induced by the x-ray beam.

Detector

The detector will be an ePix10K-2.1M capable of 120 Hz operation (temporarily unavailable) or a Jungfrau 16M capable of 120 Hz operation with a 4000 x 4000 frame size of 75 µm pixels. It is anticipated this detector will be available this run but for more information about this detector please contact MFX Instrument Staff.

MFX Instrument Staff

Leland Gee, Daniel Rosenberg, Sebastian Dehe, Fred Poitevin, Sandra Mous, Greg Gate, Mike Glownia, Roberto Alonso-Mori, Andy Aquila, Mark Hunter, Meng Liang, Ray Sierra, Sebastien Boutet

Parameter Table

To be considered for scheduling in this standard configuration, users will be required to include a table in the proposal that lists the specific experimental parameters to ensure compatibility with these configurations. If the experimental parameters are not compatible with the standard configuration or if the table of parameters is incomplete, the proposal will be reviewed and considered for scheduling as general user proposal. Please see the table of required parameters. No fundamental changes to the standard configurations will occur, but some details of the configuration may be updated in response to inquiries, so users should recheck the website before submitting your proposal to confirm that you have the latest information. Address any questions to the instrument staff.

MFX Standard Configuration #3 for Run 26

#3 Horizontal Liquid Jet Helium Chamber for Solution scattering or crystallography combined with emission spectroscopy

Types of Experiments

With this standard configuration, MFX will be able to support time-resolved wide-angle scattering or crystallography, X-ray absorption and X-ray emission measurements for the study of photo-excited molecular dynamics in the solution or crystalline phase. A Von Hamos spectrometer will be mounted above the sample to optimize the emission signal as a result of the new vertically polarized undulator.

The von Hamos spectrometer can cover the following X-ray emission lines: Mn Kß1,3, Kß2,5 and Kα, Fe Kß1,3 and Kß2,5, Co Kß1,3 and Kß2,5, Ni Kß1,3 and Kß2,5, Ti Kß1,3 and Kß2,5 and V Kα.

Though it is not part of the standard configuration, a newly developed spectrometer based on polycapillary optics (polyXAS) is now available for measuring X-ray absorption spectra of 3d and 5d transition metals from low-concentration solution-phase samples (well below 1 mM). This spectrometer is compatible with (but not part of) the liquid jet endstation (LJE) standard configuration. For more information about this instrument and its capabilities please contact Roberto Alonso-Mori (robertoa@slac.stanford.edu).

X-ray and X-ray Focus

Energies up to 25keV is now available. The MFX Instrument operates in pink mode. Refractive Be lenses will be available to deliver a beam size ranging from 3 to 200 μm at the sample. For experiments that don’t require specific photon energy and for scheduling purposes the default photon energy of 9.831 keV will be used for standard configuration.

Optical Pump Lasers

Time-resolved experiments employing tunable femtosecond pulses will be supported under this standard configuration. In addition to the 800/400 nm 50 fs Ti:Sapphire fundamental/2nd harmonic wavelengths, an OPA will be available to cover the wavelength range of 480-2400 nm. The optical pump beam will be propagating collinearly with the X-ray beam with <2 degree crossing angle. The pulse duration will be below 70 fs. We note that the efficiency of the optics and the performance of the laser and the OPA will not be the same for the entire wavelength range. The achievable peak intensity/fluence will be determined by the existing optical system and will not be modified. Contact the MFX scientists to discuss specific needs and to confirm whether they can be achieved in this standard configuration of the laser.

Timing diagnostics

The spectral-encoding based timing tool will be available to provide shot-to-shot jitter measurement. We expect a time resolution of 100 fs considering the pump/probe pulse duration as well as the jitter correction accuracy.

Sample Manipulation and Temperature Control

A helium purged sample chamber including sample monitoring and cleanup slits will be used to house the liquid jet, with Kapton windows to allow X-ray scattering and emission to be measured by detectors outside the chamber. A horizontal liquid jet driven by HPLC pumps will be used to deliver the sample into the interaction point.


Every user group accepted and scheduled to use the MFX standard configuration will be strongly advised to test the injection of their sample at the LCLS Sample Characterization Lab prior to the experiment.


Detectors

An ePix10K-2.1M capable of 120 Hz operation (temporarily unavailable) or a Jungfrau 16M capable of 120 Hz operation with a 4000 x 4000 frame size of 75 µm pixels will be mounted downstream of the chamber for forward scattering. The X-ray emission spectra will be measured by an ePix100 detector. For more information about this detector please contact MFX Instrument Staff.

 

MFX Instrument Staff

Leland Gee, Daniel Rosenberg, Sebastian Dehe, Fred Poitevin, Sandra Mous, Greg Gate, Mike Glownia, Roberto Alonso-Mori, Andy Aquila, Mark Hunter, Meng Liang, Ray Sierra, Sebastien Boutet

Parameter Table

To be considered for scheduling in this standard configuration, users will be required to include a table in the proposal that lists the specific experimental parameters to ensure compatibility with these configurations. If the experimental parameters are not compatible with the standard configuration or if the table of parameters is incomplete, the proposal will be reviewed and considered for scheduling as general user proposal. Please see the table of required parameters. No fundamental changes to the standard configurations will occur, but some details of the configuration may be updated in response to inquiries, so users should recheck the website before submitting your proposal to confirm that you have the latest information. Address any questions to the instrument staff.

LCLS proposals are submitted through the User Portal.

MFX LINKS

MFX factsheet

Download MFX Fact Sheet (PDF)  

News Feature: New MFX Experimental Station at LCLS Sees First X-ray Light

MFX CONTACTS

Leland Gee

MFX Instrument Lead
(650) 926-3234  
lbgee@slac.stanford.edu

Kelsey Banta

Area Manager  
(650) 926-3819
hayes@slac.stanford.edu

Mark Hunter

BIO Department Head  
(650) 926-6294  
mhunter2@slac.stanford.edu

Roberto Alonso-Mori

Lead Scientist  
(650) 926-4179  
robertoa@slac.stanford.edu

Andy Aquila

Staff Scientist  
(650) 926-2682  
aquila@slac.stanford.edu

Sandra Mous

Associate Scientist  
(650) 926-6225
smous@slac.stanford.edu

Fred Poitevin

Staff Scientist  
(650) 926-5326  
fpoitevi@slac.stanford.edu

Ray Sierra

Staff Scientist  
(650) 926-3148  
rsierra@slac.stanford.edu

Sebastian Dehe

Project Scientist  
dehe@slac.stanford.edu

Greg Gate

Laser Scientist  
(650) 926-2017  
gate@slac.stanford.edu

Mike Glownia

Laser Scientist  
(650) 926-5456  
jglownia@slac.stanford.edu

James Baxter

Associate Scientist  
(650) 926-5052  
jb2717@slac.stanford.edu

Daniel Rosenberg

Associate Scientist  
(650) 926-4740  
djr@slac.stanford.edu

-

MFX Control Room
(650) 926-1745  
MFX Hutch
(650) 926-1845

MFX LOCATION

MFX location in Far Experimental Hall (FEH), Hutch 4.5
Far Experimental Hall (FEH), Hutch 4.5
Complete LCLS Instrument Map
Complete Instrument Map

Become A user

SVG

Review LCLS Schedules

Review Info on Proposals

Review LCLS Policies

Review Machine FAQ, Parameters, Status

Register as User and Submit Proposal

Subscribe to LCLSUO E-mail List

Confirm User Agreements

Industry - Research Partnerships

LCLS | Linac Coherent Light Source
2575 Sand Hill Road MS103
Menlo Park, CA 94025
  • Facebook
  • Twitter
  • Instagram
  • Flickr
  • Youtube
  • LinkedIn
  • Staff portal
  • Privacy policy
  • Accessibility
  • Vulnerability disclosure
SLAC
  • SLAC home
  • Maps & directions
  • Emergency info
  • Careers

© 2025 SLAC National Accelerator Laboratory is operated by Stanford University for the U.S. Department of Energy Office of Science.

Stanford University U.S. Department of Energy
Top Top
Back to top Back to top